polaris.tasks.ocean.horiz_press_grad.analysis.Analysis

class polaris.tasks.ocean.horiz_press_grad.analysis.Analysis(component, indir, dependencies)[source]

A step for analyzing two-column HPGA errors versus a reference solution and versus the Python-computed initial-state solution.

Variables:

dependencies_dict (dict) –

A dictionary of dependent steps:

referencepolaris.Step

The reference step that produces reference_solution.nc

initdict

Mapping from horizontal resolution (km) to Init step

forwarddict

Mapping from horizontal resolution (km) to Forward step

__init__(component, indir, dependencies)[source]

Create the analysis step

Parameters:
  • component (polaris.Component) – The component the step belongs to

  • indir (str) – The subdirectory that the task belongs to, that this step will go into a subdirectory of

  • dependencies (dict) – A dictionary of dependent steps

Methods

__init__(component, indir, dependencies)

Create the analysis step

add_dependency(step[, name])

Add step as a dependency of this step (i.e. this step can't run until the dependency has finished).

add_input_file([filename, target, database, ...])

Add an input file to the step (but not necessarily to the MPAS model).

add_output_file(filename[, validate_vars, ...])

Add the output file that must be produced by this step and may be made available as an input to steps, perhaps in other tasks.

check_properties()

This method should be overridden to check properties of step outputs

constrain_resources(available_resources)

Constrain cpus_per_task and ntasks based on the number of cores available to this step

map_from_native_model_vars(ds)

If the model is Omega, rename dimensions and variables in a dataset from their Omega names to the MPAS-Ocean equivalent (appropriate for datasets that are output from the model)

map_to_native_model_vars(ds)

If the model is Omega, rename dimensions and variables in a dataset from their MPAS-Ocean names to the Omega equivalent (appropriate for input datasets like an initial condition)

open_model_dataset(filename, **kwargs)

Open the given dataset, mapping variable and dimension names from Omega to MPAS-Ocean names if appropriate

process_inputs_and_outputs()

Process the inputs to and outputs from a step added with polaris.Step.add_input_file() and polaris.Step.add_output_file().

run()

Run this step of the test case

runtime_setup()

Update attributes of the step at runtime before calling the run() method.

set_resources([cpus_per_task, ...])

Update the resources for the subtask.

set_shared_config(config[, link])

Replace the step's config parser with the shared config parser

setup()

Add inputs from reference, init and forward steps

validate_baselines()

Compare variables between output files in this step and in the same step from a baseline run if one was provided.

write_model_dataset(ds, filename)

Write out the given dataset, mapping dimension and variable names from MPAS-Ocean to Omega names if appropriate

Attributes

component